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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015882194.1_cds_XP_016438064.1_33768
CDS Infomation

[gene=LOC107764054] [db_xref=GeneID:107764054] [protein=synaptotagmin-1-like isoform X2] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016438064.1] [location=complement(join(<469..543,973..1074,1233..1351,2265..2388,2478..2528,2613..2711,4241..4255))] [gbkey=CDS]
Sequence

ATGATGATGGTTGAGGACCTTGTTATTCATCCATTGGTCGAACGAGACACTCAAAGCTTG
CAGCAATTACTTCCTGAAATTCCTATTTGGGTTAAATGTCCGGATTATGACCGTGTGGAC
TGGCTCAACAAATTTCTTGAGCTCATGTGGCCTTATCTGGACAAGGCTATTTGCAGGACT
GCGAAGAATATTGCTGCACCTATTATTGTGGAGCAAATTCCAAAGTATAAAATTGACTCT
GTTGAATTTGAAACACTGACTTTGGGGTCCTTACCACCTACTTTCCAAGGTATGAAGGTC
TATGTTACTGATGAAAAAGAGTTGATGATGGAACCATACTTAAAATGGGCCAGCAATCCT
AATGTCTCTGTTGCGGTCAAAGCATTTGGATTGAAAGCAACTGTTCAGGTTATCGACTTG
CAGATCTTTGCAGCTCCACGTATTACTCTGAAGCCTCTAGTTCCGAGCTTTCCTTGTTTT
GCCAAAATCTTTGTGTCACTTATGGAGAAGCCACATGTTGACTTCGGGTTGAAGCTATTG
GGGGCTGATCTAATGGCCATTCCTGGGTTGTACAGGTTTGTCCAG

Peptide Sequence

PEP ID

XP_016438064.1
PEP Infomation

PREDICTED: synaptotagmin-1-like isoform X2 [Nicotiana tabacum]
Sequence

MMMVEDLVIHPLVERDTQSLQQLLPEIPIWVKCPDYDRVDWLNKFLELMWPYLDKAICRT
AKNIAAPIIVEQIPKYKIDSVEFETLTLGSLPPTFQGMKVYVTDEKELMMEPYLKWASNP
NVSVAVKAFGLKATVQVIDLQIFAAPRITLKPLVPSFPCFAKIFVSLMEKPHVDFGLKLL
GADLMAIPGLYRFVQETIKDQVANMYLWPKALEVQILDPSKAMKRPVGILHVKILRAMKL
RKKDLLGASDPYVKLKLTESKLPSKKTTVKHSNLNPEWNEEFSMVVKNPESQALEISVYD
WEQIGKHDKMGTNIVPLRDLTPDESKTMTLDLLKNMDLTDVQNDKQRGQIVVELTYKPFK
EEDLPKDFEKAGTVLKAPEGTPPGGGVLVIIVHQAEDVEGKNHTNPYVRIIFKGEERKTK
QVKKNRDPRWEEEFSFVLEEPPVNDKLHVEVISTSTRIGLLHPKEVLGYIDISLSDVVNN
KRINEKYHLIDSKTGRIQVELQWRTAK

Transcript Sequence

Gene sequence data has not been registered.